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Gene Report
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ACYPI007650
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Description
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| Synonym | ACYPI007650_1.1 | | Synonym | LOC100166809 |
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Genomic Position
| Start | Stop | Strand | | 207096 | 211256 | MINUS |
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Transcripts
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| mRNA Name | Scaffold | Start | Stop | Strand | XM_001948514 | EQ125780 | 207096 | 211256 | MINUS |
>XM_001948514_mRNA
attttcatccattttgtacattttatatgagcgaatagctgtaatacgaaactgcccgctctgtatattccaaacaaaatacatacttaaaatcaacacc
atgaagaagtttgtttagtaattaattgacaattatatcgtttagaagttaaattatcattaaaatgcctgttgcacaaaaaaaaaaaatttaaaacaga
taacagctacactataaaagtaatggttgtataagactacgtgtatgattattaatcaaactgttgtttatcatagagtaaagcgaactcataacgtgta
gaacacaaaactagagaaatataacttgtttaatgttgtgatactatattataatattataataggtagtaagtttttgtcaattagaaagtgaacaatg
cattggattggtgtatgttgtttctggtcattatttgttttcgtcttgtgcgatactagtaattcgacaaacaatcggacgttcattgtagattatgaaa
aaaacgaattcctaaaagacggagaagtgttccgatacgtttctggtgatttgcactattttcgagttcctaaatcttattggaaagacagaattcaaaa
aataaaagcagctggattaaatgctataacaacttacgtagaatggagcttacatgaaccatttcctggcacatataatttcgaagggatggccgacttg
gagtatttcataaaattgatccaagacgaaggcatgtacctactcttgagacctggtccatacatatgtgctgaacgtgatttcggtggatttccatatt
ggttattgaacgttacgcctaaggggagcttaaggacaaatgattcgagttataaaaagtatgtttcacaatggtttagtgtgcttatgaagaaaatgca
acctcatttgtacggaaatgggggaaatatcattatggtccaggtggaaaatgagtatgggagttactacgcctgtgattcagactacaaactgtggtta
cgtgatttattaaaaggatacgtagaagacaaagctttactctatacaattgatatatgtaggcaaagagattttgactgtggtcctattccggaagtat
acgcgaccgttgatttcgggatttcagtaaatgctgccacatgttttgactttttgaaaaactatcaaaaaggcgggccatctgtcaactctgagtttta
tccaggttggttggctcattggcaggaaccacatcctaaagttaattctgacgatgttgtgaaccatatgaaatcaatgctgtcattgaacgcctcgttt
agtttttatatgttccacggaggaactaattttggatttacgtctggtgccaatacaaacgaatccgatgcaaatattggatatttacctcaactaacat
catacgattatgatgctccgataaccgaagctggtgacctgaccgaaaaatattttaagataaaacagacactcgagaatgccaaacattccggcgcggt
agtagagaatatcagcgttatatcgccgattccaatgcttaaggcagcctatggcacattcttcttacgaccattggttagtatatttgaaaaagttact
catcggataaatccagtgttaagctttaacccgttaacgtttgaagtcatggatatcaacactggattcgttatgtatgaaacaatattattaaataagt
tccaaaacccagtgaatctaaccgtgaactctgtaagagatcgagcaatcatatacctggatcaagtacaagttggcactatgaatcgattaaaaggaaa
cacaactatatttttagacataaaaaaaaattctgctcaaacactgagtattttggttgagaaccaaggaaggatcaactacggagatttcatcgaagac
agaaagggaatcttgggtcatgtacttcttgacaatgaaaaagtgggtccgtggaaaatgattgcgcaccctctaaacgaaacgtcttggctttcttcga
ttaaaccagtggacaatgtccaagtaccggcattttatagaacacaatttactttgccagaggattatacgagtaccttagatacttatctggatacttc
aggttggactaagggagtagcgtttttaaatgatataaatctgggacgatattggccactcgccggacctcagattacactctacgtacctgctagtttt
ctaaagccaccgcctgcggtcaatacacttgtcatgtttgaacttgaacgtgcgcctcaagacctgtcaattaagtttgtagacaagccgactatcaatg
gccctataaacacagattaaatacctattatgatgtatcgcctatattactaattattaattaataatatgatgttgataac |
>XM_001948514_prot
MHWIGVCCFWSLFVFVLCDTSNSTNNRTFIVDYEKNEFLKDGEVFRYVSGDLHYFRVPKSYWKDRIQKIKAAGLNAITTYVEWSLHEPFPGTYNFEGMAD
LEYFIKLIQDEGMYLLLRPGPYICAERDFGGFPYWLLNVTPKGSLRTNDSSYKKYVSQWFSVLMKKMQPHLYGNGGNIIMVQVENEYGSYYACDSDYKLW
LRDLLKGYVEDKALLYTIDICRQRDFDCGPIPEVYATVDFGISVNAATCFDFLKNYQKGGPSVNSEFYPGWLAHWQEPHPKVNSDDVVNHMKSMLSLNAS
FSFYMFHGGTNFGFTSGANTNESDANIGYLPQLTSYDYDAPITEAGDLTEKYFKIKQTLENAKHSGAVVENISVISPIPMLKAAYGTFFLRPLVSIFEKV
THRINPVLSFNPLTFEVMDINTGFVMYETILLNKFQNPVNLTVNSVRDRAIIYLDQVQVGTMNRLKGNTTIFLDIKKNSAQTLSILVENQGRINYGDFIE
DRKGILGHVLLDNEKVGPWKMIAHPLNETSWLSSIKPVDNVQVPAFYRTQFTLPEDYTSTLDTYLDTSGWTKGVAFLNDINLGRYWPLAGPQITLYVPAS
FLKPPPAVNTLVMFELERAPQDLSIKFVDKPTINGPINTD |
| Exon | Start | Stop | Strand | | ACYPI007650-RA-E1_0 | 210790 | 211256 | MINUS | | ACYPI007650-RA-E2_0 | 210474 | 210641 | MINUS | | ACYPI007650-RA-E3_0 | 209561 | 209712 | MINUS | | ACYPI007650-RA-E4_0 | 209421 | 209485 | MINUS | | ACYPI007650-RA-E5_0 | 209265 | 209360 | MINUS | | ACYPI007650-RA-E6_0 | 208879 | 209069 | MINUS | | ACYPI007650-RA-E7_0 | 208364 | 208714 | MINUS | | ACYPI007650-RA-E8_0 | 208015 | 208297 | MINUS | | ACYPI007650-RA-E9_0 | 207815 | 207956 | MINUS | | ACYPI007650-RA-E10_0 | 207492 | 207699 | MINUS | | ACYPI007650-RA-E11_0 | 207096 | 207365 | MINUS |
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Similarity
| organism | tissue_type | clone_lib |
Transcript alignmentsStart | End | Strand | Name | | Acyrthosiphon pisum | | Acyrthosiphon pisum adult bacteriocyte | 209560 | 211014 | - | BP537943 |
| Acyrthosiphon pisum | | Acyrthosiphon pisum adult bacteriocyte | 210786 | 211014 | - | BP537943 |
| Acyrthosiphon pisum | Whole body, nymphs and adults, winged and wingless | Pea aphid whole body normalized full length cDNA library | 207101 | 207701 | + | FF315890 |
| Acyrthosiphon pisum | Whole body, nymphs and adults, winged and wingless | Pea aphid whole body normalized full length cDNA library | 207101 | 207701 | + | FF315890 |
Summary of organism| value | Number | frequency | | Acyrthosiphon pisum | 4 | 1.0 |
Summary of tissue_type| value | Number | frequency | | Whole body, nymphs and adults, winged and wingless | 2 | 1.0 |
Summary of clone_lib| value | Number | frequency | | Pea aphid whole body normalized full length cDNA library | 2 | 0.5 | | Acyrthosiphon pisum adult bacteriocyte | 2 | 0.5 |
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Protein Similarities| query_name | analysis | hit_name | description | interpro_id | go | positions |
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OtherProperties
| note | Derived by automated computational analysis using gene prediction method: GNOMON. | | db_xref | GeneID:100166809 | | curation_status | unchecked |
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Gmod Report System - copyright INRA 2009 |
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