GRS - Gmod Report System - Chado Genome Report

Genomic resources

Gene Report

ACYPI007233

ID	ACYPIG245232-Martin

Name	ACYPIG245232-Martin

Synonym	ACYPIG245232-Martin
Synonym	Glutathione S-Transferase; theta class
Synonym	ACYPI007233_1.1

owner

Name : Martin de Vos
Institute : Boyce Thompson Institute

Genomic Position

Start	Stop	Strand
6689	8479	MINUS

Scaffold

EQ112910

mRNA Name	Scaffold	Start	Stop	Strand
ACYPIT245232-Martin	EQ112910	6689	8479	MINUS

>ACYPIT245232-Martin_mRNA
gtgttttcgactttccttgaagaacattagagtctaatggttagacaattaattctctaatgtaaaaatatgttcatgggtttcgggtgtatccaaaatc
taaatcatagggtaataaatagcaagcaacaattttattaaattaaatttaatctgtgataatggcgttacataattaattcaacaattaaaaatgattg
gttttaaaacgtctggaccacggtcctagaagataagaccatgttttcggtgaaacgtggattcaacaagtgtattgggtagttcaattttttcaacacc
atggtcacattaaagttttattatgactttttgtcacaaccatgcagaactttgtacatatttatgaagaaaaccaaaatcccgtttgaaccaaaaccag
taaatttgagacaaggagagcatctcactaaagaatttgtaagcttaaatccgttcaagaaagtaccttttattgatgacaagggaacagttttaataga
aagtgtttcaatattacgttatttgtgtcgaacatataacgtagctgaccattggtatcccaaagacatccaaaggcaggctcttgttgatcaatattta
gagtggcaacataataatactagagctcattgtactgagtattttcggcacaaggcattatggccgctaaaaactggccgggaagcaaatactgaaaagg
ttacagtactagaaaatagaatgattgaaaatctaaatttattagaaaatatctggttaaaagataaaccatttttgtgtggagatgaaatttctgtatc
tgatcttgtcggtgcatgtgaagtagaacaaccaagaattgctggttttgatccattagtggatcgtccaaatttaaccaaatggatagctagagttcaa
tcagagttttctccttattacgaagaagcacatcaagtaatcgaacaaactgctgatgaatacaaacgttatgtcaatgaattaagtaaaaaaattagtt
aatattgtagattgatattatttaaaatttatattttattataaaatcatttagttatataaatttaaaactttatataggaatttatatatattaaata
ataaattataatataatgtaatttatctcaattttaatttttctacttacctttgaaaatatatttgttttttataataaaataaattactaaatagttt
acattttcaaaccacttaagagtatgtactatgtagtcaaatttttgaaaaataaagattttaattcattgtttaaaaaaa

>ACYPIT245232-Martin_prot
MVTLKFYYDFLSQPCRTLYIFMKKTKIPFEPKPVNLRQGEHLTKEFVSLNPFKKVPFIDDKGTVLIESVSILRYLCRTYNVADHWYPKDIQRQALVDQYL
EWQHNNTRAHCTEYFRHKALWPLKTGREANTEKVTVLENRMIENLNLLENIWLKDKPFLCGDEISVSDLVGACEVEQPRIAGFDPLVDRPNLTKWIARVQ
SEFSPYYEEAHQVIEQTADEYKRYVNELSKKIS

Exon	Start	Stop	Strand
ACYPIE245232-Martin	8236	8479	MINUS
ACYPIE245233-Martin	7960	8132	MINUS
ACYPIE245234-Martin	7792	7880	MINUS
ACYPIE245235-Martin	7436	7587	MINUS
ACYPIE245236-Martin	7192	7373	MINUS
ACYPIE245237-Martin	6689	7135	MINUS

Transcript alignments

organism	tissue_type	clone_lib	Start	End	Strand	Name
Acyrthosiphon pisum	Whole body, nymphs and adults, winged and wingless	Pea aphid whole body normalized full length cDNA library	7299	8479	-	EX602737
Acyrthosiphon pisum	Whole body, nymphs and adults, winged and wingless	Pea aphid whole body normalized full length cDNA library	7078	8161	-	EX603271
Acyrthosiphon pisum	Whole body, nymphs and adults, winged and wingless	Pea aphid whole body normalized full length cDNA library	7047	8165	-	EX603847
Acyrthosiphon pisum	Whole body, nymphs and adults, winged and wingless	Pea aphid whole body normalized full length cDNA library	6839	7829	+	EX603963
Acyrthosiphon pisum	Whole body, nymphs and adults, winged and wingless	Pea aphid whole body normalized full length cDNA library	6689	7535	+	EX604047
Acyrthosiphon pisum	Whole body, nymphs and adults, winged and wingless	Pea aphid whole body normalized full length cDNA library	6839	8029	+	EX604488
Acyrthosiphon pisum	Whole body, nymphs and adults, winged and wingless	Pea aphid whole body normalized full length cDNA library	6971	8136	-	EX619540
Acyrthosiphon pisum	Whole body, nymphs and adults, winged and wingless	Pea aphid whole body normalized full length cDNA library	6849	7860	+	EX620901
Acyrthosiphon pisum	Whole body, nymphs and adults, winged and wingless	Pea aphid whole body normalized full length cDNA library	7188	8477	-	EX632975
Acyrthosiphon pisum	Whole body, nymphs and adults, winged and wingless	Pea aphid whole body normalized full length cDNA library	6689	7241	+	EX634081
Acyrthosiphon pisum	Whole body, nymphs and adults, winged and wingless	Pea aphid whole body normalized full length cDNA library	6714	7522	+	EX646546

Summary of organism

value	Number	frequency
Acyrthosiphon pisum	11	1.0

Summary of tissue_type

value	Number	frequency
Whole body, nymphs and adults, winged and wingless	11	1.0

Summary of clone_lib

value	Number	frequency
Pea aphid whole body normalized full length cDNA library	11	1.0

Protein Similarities

query_name

analysis

hit_name

description

interpro_id

go

positions

OtherProperties

date	Thu Oct 30 10:54:37 EDT 2008
problem	false

Gmod Report System - copyright INRA 2009