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Gene Report
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ACYPI007204
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Description
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| Synonym | ACYPI007204_1.1 | | Synonym | LOC100166321 |
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Genomic Position
| Start | Stop | Strand | | 84670 | 106772 | PLUS |
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Transcripts
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| mRNA Name | Scaffold | Start | Stop | Strand | XM_001943123 | EQ116276 | 84670 | 106772 | PLUS |
>XM_001943123_mRNA
atgctgaaaagcaagcgtataagctgggcaggacacatatggagagcacaagaccagttaattcgagaggcaacaaaatggatccccaatggaaagaggc
cattaggaaggccaagacaaagatgggaaggcagagttaagagtgacctgcaaatgctaggagtaataaacggcaaagtatatcggctacaatattctaa
gtcagacttctggtgcaggtactctgtgcagcagcaacaacaggcggatcagcaaccgcggaccggtttcgacgggatattccaacagcaacagcgacag
cagcagcagcaacagcaagggttccagcggagtggccggaaattcactaccgacgaacccgaacagaatttcgagacttccggtaggttcacgtcccgga
ccgatcctcgggtgtcacctataccgacacccccgattcaacagggacctctgacgctgtccaacagcaacatccggcaattgctgcaacagctcgacgt
ggccggatcgcaacagtgcaacctcaacgtgcaggcgcaatgggatttcgagacaaacgtcaacgagggaacgcaaataagagcgttggagcaacaattg
ttgtattccgaatttcaacgaaaagtattttcgataatgacaagattgaatctggacaatgtcatcgatcccaacctaagaaggcagctcaagtttttgt
caatgccaggacctgctgcactaccacaagaacaactgagtcgatacaaccggctcataaacgacatgttagctgtttataatagcgcttctgtttgcgc
tttcgacgaaccgttgaaatgtggtctcaggttagacccagatttgaacatgataatgtctcggagtcgagattggaacgaactacaacacacttggata
gaatggagaagaagaacaggacaaaaagtcagagacatgtttgaacagctagtagatgttagcaatcaagcagctttattaaacaatgtatcggatgcgt
ctgaaatgtggaaatttccgtacgaatcaccctcgatgagatttgaattggaagacgcttgggaacaaataaaacccttatacgaacaactccatgccta
cgtcagaaagaagttacgggatctttacgggcccgagagaataagtcgagaagcaccattgcccgcccatatcttaggaaacatgtggggtcagtcttgg
gaaaatattttagacttgaccataccgtatccgggaaaaaattatttggatgtcacaccacaaatgatcaaacagggatacacaccagctgcaatgttta
gagtggcagaagaatttttcatatcgttaaacatgagttcaatgcctcaatctttttgggccaattcagtcttagaggaacttccaggacagcctataat
ttgtcaaccttctgcttgggatttttgcaacagacaagattataggattaaaatgtgcacccaagttaatatgaaagattttatcactgtccatcatgaa
atggctcatgtacaatattttttgaattacaaaaaacaaccaaaagtgtatcgtgatggtgccaatccaggattccacgaagctctaagcgaggcaatat
cgctctctgtgtcaaccccaaagcatttgcaaacgctgggactgatattgaactctgttgatgacattccccataacataaactatttgtttggattggc
gatggacaagcttacatttttgccttttagcttggcactcgacttatggcggtgggatatattcaaagggaccacgcacaaggagagatacaattgtcat
tggtgggatttacgagaacgacttggcggtgtcaagcctccagtactccggtccgaaacagatttcgatccgggatcaaaatatcacgtgcccgccaaca
ttccttacattgggtaa |
>XM_001943123_prot
MLKSKRISWAGHIWRAQDQLIREATKWIPNGKRPLGRPRQRWEGRVKSDLQMLGVINGKVYRLQYSKSDFWCRYSVQQQQQADQQPRTGFDGIFQQQQRQ
QQQQQQGFQRSGRKFTTDEPEQNFETSGRFTSRTDPRVSPIPTPPIQQGPLTLSNSNIRQLLQQLDVAGSQQCNLNVQAQWDFETNVNEGTQIRALEQQL
LYSEFQRKVFSIMTRLNLDNVIDPNLRRQLKFLSMPGPAALPQEQLSRYNRLINDMLAVYNSASVCAFDEPLKCGLRLDPDLNMIMSRSRDWNELQHTWI
EWRRRTGQKVRDMFEQLVDVSNQAALLNNVSDASEMWKFPYESPSMRFELEDAWEQIKPLYEQLHAYVRKKLRDLYGPERISREAPLPAHILGNMWGQSW
ENILDLTIPYPGKNYLDVTPQMIKQGYTPAAMFRVAEEFFISLNMSSMPQSFWANSVLEELPGQPIICQPSAWDFCNRQDYRIKMCTQVNMKDFITVHHE
MAHVQYFLNYKKQPKVYRDGANPGFHEALSEAISLSVSTPKHLQTLGLILNSVDDIPHNINYLFGLAMDKLTFLPFSLALDLWRWDIFKGTTHKERYNCH
WWDLRERLGGVKPPVLRSETDFDPGSKYHVPANIPYIG |
| Exon | Start | Stop | Strand | | ACYPI007204-RA-E1_0 | 84670 | 84848 | PLUS | | ACYPI007204-RA-E2_0 | 91430 | 91837 | PLUS | | ACYPI007204-RA-E3_0 | 99551 | 99710 | PLUS | | ACYPI007204-RA-E4_0 | 100014 | 100111 | PLUS | | ACYPI007204-RA-E5_0 | 100205 | 100349 | PLUS | | ACYPI007204-RA-E6_0 | 100438 | 100630 | PLUS | | ACYPI007204-RA-E7_0 | 100713 | 100811 | PLUS | | ACYPI007204-RA-E8_0 | 100928 | 101098 | PLUS | | ACYPI007204-RA-E9_0 | 102493 | 102618 | PLUS | | ACYPI007204-RA-E10_0 | 102688 | 102932 | PLUS | | ACYPI007204-RA-E11_0 | 106669 | 106772 | PLUS |
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Similarity
| organism | tissue_type | clone_lib |
Transcript alignmentsStart | End | Strand | Name | | Acyrthosiphon pisum | antennae | ID0AEE | 88559 | 88894 | + | DY225472 |
| Acyrthosiphon pisum | antennae | ID0AEE | 88559 | 88894 | + | DY225472 |
| Acyrthosiphon pisum | antennae | ID0AEE | 102003 | 102683 | + | DY227028 |
| Acyrthosiphon pisum | antennae | ID0AEE | 102003 | 102683 | + | DY227028 |
Summary of organism| value | Number | frequency | | Acyrthosiphon pisum | 4 | 1.0 |
Summary of tissue_type| value | Number | frequency | | antennae | 4 | 1.0 |
Summary of clone_lib| value | Number | frequency | | ID0AEE | 4 | 1.0 |
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Protein Similarities| query_name | analysis | hit_name | description | interpro_id | go | positions |
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OtherProperties
| note | Derived by automated computational analysis using gene prediction method: GNOMON. | | db_xref | GeneID:100166321 | | curation_status | unchecked |
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Gmod Report System - copyright INRA 2009 |
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