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Gene Report
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ACYPI006866
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Description
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| Synonym | ACYPI006866_1.1 | | Synonym | LOC100165955 |
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Genomic Position
| Start | Stop | Strand | | 24883 | 40419 | MINUS |
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Transcripts
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| mRNA Name | Scaffold | Start | Stop | Strand | XM_001950881 | EQ127099 | 24883 | 40419 | MINUS |
>XM_001950881_mRNA
tagtgctctatcgcaagtaggtggtaaacattacactttgttttgtttttgatatttcagtttgtttttaagtttttttttagttctgtatgcgttttta
tttctgttagtgtaattattatttgtaattaatgtaattttattattcattacttttattattatttttttattacttttatttatttaattgtttacgc
cgtacatagtatatatatatatattatatatatcatataatatatatatagccatattatagaaatgacgggaagacgaattgtagtaatggccagacat
ggtgagagcgaatggtctaaaaacaatgtgttttgtggatggtacgattcacatttatctgatcgaggtatgaacgaagccctcgaatgcgcagaattgt
tgaaagaatcaaattataaatttgacaaagcttatacatctctgttgactagagctcatcagactttaaaaataattactgaacacattggtcagcctac
tttgccagtagaagaatcatggaggctaaacgaaagacattacggagctttgacaggatttaataaagctgaattagctgaagaatatggtgaaagtcag
gtacagatttggagaagaagttttgacgttcttccacctgtgatggacaagtcacatgcatattatatgtccatttggtgccacccaaaaatcgtggctc
actcatacacttcaagcgaaaaatttccttctaccgaatcacttaaagagacgatggaaagggttataccttattgggataattttattgtgccaaatat
taaacgaggacaacgcgttttgattgttgcccatggtacggttttgcgaagtcttatcaagtatttagatggagtatcagataacgacatttgctcaata
aacatcccttcgggtattccattcgtttacgaatttgatgatgacatgaatgttgtgtcttcaaaaaaatttttgggtgataaaaaacgaatagaggaag
gaatagcaagagctgcatcaatcggttctcattaaactgccaattatgaaatcgacttcagcaaatgactatttttaatctgaaattttgtcagattttt
gctatttaattattacgttttatttaattttataagttaatttttaaatatataattattgataaactattctttttataataaaaatatattattaata
atttaatgaaaaa |
>XM_001950881_prot
MTGRRIVVMARHGESEWSKNNVFCGWYDSHLSDRGMNEALECAELLKESNYKFDKAYTSLLTRAHQTLKIITEHIGQPTLPVEESWRLNERHYGALTGFN
KAELAEEYGESQVQIWRRSFDVLPPVMDKSHAYYMSIWCHPKIVAHSYTSSEKFPSTESLKETMERVIPYWDNFIVPNIKRGQRVLIVAHGTVLRSLIKY
LDGVSDNDICSINIPSGIPFVYEFDDDMNVVSSKKFLGDKKRIEEGIARAASIGSH |
| Exon | Start | Stop | Strand | | ACYPI006866-RA-E1_0 | 40157 | 40419 | MINUS | | ACYPI006866-RA-E2_0 | 29317 | 29422 | MINUS | | ACYPI006866-RA-E3_0 | 28606 | 28839 | MINUS | | ACYPI006866-RA-E4_0 | 25307 | 25578 | MINUS | | ACYPI006866-RA-E5_0 | 24883 | 25225 | MINUS |
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Similarity
| organism | tissue_type | clone_lib |
Transcript alignmentsStart | End | Strand | Name | | Acyrthosiphon pisum | Whole body, nymphs and adults, winged and wingless | Pea aphid whole body normalized full length cDNA library | 24883 | 25226 | + | FF317239 |
| Acyrthosiphon pisum | head | ID0ACC | 24936 | 28844 | + | CV829482 |
| Acyrthosiphon pisum | head | ID0ACC | 24936 | 28844 | + | CV833395 |
| Acyrthosiphon pisum | head | ID0ACC | 24936 | 28844 | + | CV836603 |
Summary of organism| value | Number | frequency | | Acyrthosiphon pisum | 4 | 1.0 |
Summary of tissue_type| value | Number | frequency | | Whole body, nymphs and adults, winged and wingless | 1 | 0.25 | | head | 3 | 0.75 |
Summary of clone_lib| value | Number | frequency | | Pea aphid whole body normalized full length cDNA library | 1 | 0.25 | | ID0ACC | 3 | 0.75 |
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Protein Similarities| query_name | analysis | hit_name | description | interpro_id | go | positions |
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OtherProperties
| note | Derived by automated computational analysis using gene prediction method: GNOMON. | | db_xref | GeneID:100165955 | | curation_status | unchecked |
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Gmod Report System - copyright INRA 2009 |
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