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Gene Report
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ACYPI006794
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Description
| ID | Histone methyltransferase (partial) with SET and SRI_2 domains related to HIF1 |
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| Name | Histone methyltransferase (partial) with SET and SRI_2 domains related to HIF1 |
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| Synonym | Histone methyltransferase (partial) with SET and SRI_2 domains related to HIF1 | | Synonym | ACYPIG520116-deanrider | | Synonym | ACYPI006794_1.1 |
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| owner | Name : Dean Rider
Institute : TAMU |
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| comments | Gene has partial EST/cDNA support | | comments | Gene has partial protein homology support |
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Genomic Position
| Start | Stop | Strand | | 3735 | 12612 | MINUS |
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Transcripts
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| mRNA Name | Scaffold | Start | Stop | Strand | Histone methyltransferase (partial) with SET and SRI_2 domains related to HIF1-transcript | EQ126601 | 3735 | 12612 | MINUS |
>Histone methyltransferase (partial) with SET and SRI_2 domains related to HIF1-transcript_mRNA
atgtgtaatcgcctaacaaaaaaagaatataaaaatctaaattatatggttcaattaaatccggatgaaattatcgattccacttcaaaaggaaatgtga
ctaggtttattaatcatagctgtgatccaaattcagttggtgaaaaatggcatgtattgggtcaatctcgtattggtttctttagcactcggcatattga
aaaaggcgaagaaattacatttgattatagttttcaaatatttggagatggtgctcaaatttgttattgtggttcatcaaaatgtcgtggatacatcaat
aaatcatctcaaattgctgaccaaaacagttctgaggatagtgaaagtgctaatgaaaatgtttttgtgtcaaaacctgagaaaaaagatcgaaaaaaaa
gaaatttggaaaataggacaacttataatgatgaaaataaattgagagagttgggcagacaattaacagaaattgccaaattaaaaactggattaaaagc
tgatcaagaaatggcaacattgaatttgaatagacttatggtacacattacagacagcgtcagtcgattacatgttttaacatttataagagaacatgat
atgaacaaaagactatttatggatttcagtggacttagtattattcataactggatgacttcaaatgaaaatgaatcatttaaattaatgattttagaaa
tcttagcagagttaccaatcacaaatagaaatacaattactaaatctaaagtactagatgttgttgctgaatgggcaaaaataccacaagacgtcaaaac
taaaatcgaaagtttagagtacgctgttacggaaattaaaaatcattgtcaagaaattgataacttactgccaaatgataatgaaataaaaaatagtctg
gtagaaaaatctagagctttgtggaaaaagtggattgtattgaaaatggtgtttaaaattcctaaaaaaatagatcaacataaaccaactacagatataa
attcatgtaaacttattgacgattgttatccatctcctatggacatatcaagtttggatcgaaaaacgtttagatattcaaataaatatgtaaataaagt
acggaataaacatgctacatctttagatcgtatgaaattgagaaaagaatataaatttaaagtggataaagaacgccaaaaaatgtttaggaaaaaggtg
atggatgaatggtatgaaaaagttgacggagtagtaaaaaagaaacccgatgaaaattacttacagcatcatcagacaataaatttccttaattcaacat
taaacaataataatggaattagtgaaaaaacaagatgggattctacttcacaagcaacacatgttgatcaaaattcaataatcaattatggtggacatac
tccttgtttgaagaattacatgccaccacaagcagtacaacaagcatttattcaatttccacagtattcttatacacagtctcaagttttctctgattgt
catgtagttaatcaaccaacattgtattgtactccttcaccactgacatctagtcaaccattggaaacacaactgcaaaatatggctaaatcaaacaata
aacatgttaatcaaaatattgaatcacctgttctatctccaacaaaacatctacttaaattagctgaaactaatgtctttaatttgatcaatgacagttt
acgcaagcattataatcctaaaaaaacaaatgttgttgaaacagaaatgaaacattccaagaaatcttgtacaagagttgtacaatctggtgcagattta
ttagcaagaattaaagtaccttcgtctgatataaagttgaaatctatttgtgatgaaaataaaagaattgttttcatcaacgaagaaaccggtgtgactt
ctaacacattaagtgaagatctattgccgactccaaaaactattcaagtatcaaaaaataataaatttgcaaatgccatatttaattctttattaaaaaa
ggtgttagaacctgaaaatgaaaactcagtactaaaaaaatttgtttcaaaaaatctcaactcaaatgttatcacatatcatgaaaccgacaaagaaatt
gaattgtataagaatatgaaaccaaaagttttaaaaaaaatagttggtcatgtaaaaactaaaaatggttttgtagctgttatgaaacgacaatggggaa
ttaaactgaaaggtttaaaaaggaaccgtgatgaaataccagctacaaaacgtaatataatgcgtaagggtagtatacatcgtttagcattgaaaaattg
tcttgtcaatacaacaaaatcagcattaaagagacatagtagtatgaatgtgaacgactatttaaaaagacctaaagaaaaaagagttacattctggata
gaaggtgagacatcaccaaatttgccacactcagaagtaagaccaattaatttgaatcaaaatattgtgaaacaaaaacctcttatgaagtgttatccat
ttgaaatacgaaatgaacctaaatatatttttcagccttcaacttctgctattcaaagtggtgataattctcaaattcctggtctcgatacaactaatga
tcaaatcattacacctattgttgcaaaattcaaagcaacaagaaataggcgcattagcttacgagacaagtcaactgaattagagcaattacgtagtcaa
agaaatcataagatacctatcagtatgatgtctttatctgtggatgtattaaaacttattcctgataacagaaaagaaatgaagaaaataattgactatt
atcattcaatggctactgttatagtaaagactttaggatcatatgctaaaaagacctgtcaacaaggacgtataagaagcgatgaagattttaaatatct
tgccaaaaaaattaatgaaaatgtgttgttaaaagagttacaattaaaaaaagtggacaaattaaaaataagtgacagtacaaaagataaagttgccgaa
tatatcagaaagtatatgtcacggtttggagaagcgtataaaagaaaaccaagtggtatgtcagcaactcgtgatacgcatgtctgtgacgtaagctttt
ctccaactggctgtgcgtggagtggtggtggagtcttcggcggcgacggcttttatggcagtgacggcggtggaccaatgagaaccggagaaatgcttac
gtcacagtacaaggctgggcggaag |
>Histone methyltransferase (partial) with SET and SRI_2 domains related to HIF1-transcript_prot
MCNRLTKKEYKNLNYMVQLNPDEIIDSTSKGNVTRFINHSCDPNSVGEKWHVLGQSRIGFFSTRHIEKGEEITFDYSFQIFGDGAQICYCGSSKCRGYIN
KSSQIADQNSSEDSESANENVFVSKPEKKDRKKRNLENRTTYNDENKLRELGRQLTEIAKLKTGLKADQEMATLNLNRLMVHITDSVSRLHVLTFIREHD
MNKRLFMDFSGLSIIHNWMTSNENESFKLMILEILAELPITNRNTITKSKVLDVVAEWAKIPQDVKTKIESLEYAVTEIKNHCQEIDNLLPNDNEIKNSL
VEKSRALWKKWIVLKMVFKIPKKIDQHKPTTDINSCKLIDDCYPSPMDISSLDRKTFRYSNKYVNKVRNKHATSLDRMKLRKEYKFKVDKERQKMFRKKV
MDEWYEKVDGVVKKKPDENYLQHHQTINFLNSTLNNNNGISEKTRWDSTSQATHVDQNSIINYGGHTPCLKNYMPPQAVQQAFIQFPQYSYTQSQVFSDC
HVVNQPTLYCTPSPLTSSQPLETQLQNMAKSNNKHVNQNIESPVLSPTKHLLKLAETNVFNLINDSLRKHYNPKKTNVVETEMKHSKKSCTRVVQSGADL
LARIKVPSSDIKLKSICDENKRIVFINEETGVTSNTLSEDLLPTPKTIQVSKNNKFANAIFNSLLKKVLEPENENSVLKKFVSKNLNSNVITYHETDKEI
ELYKNMKPKVLKKIVGHVKTKNGFVAVMKRQWGIKLKGLKRNRDEIPATKRNIMRKGSIHRLALKNCLVNTTKSALKRHSSMNVNDYLKRPKEKRVTFWI
EGETSPNLPHSEVRPINLNQNIVKQKPLMKCYPFEIRNEPKYIFQPSTSAIQSGDNSQIPGLDTTNDQIITPIVAKFKATRNRRISLRDKSTELEQLRSQ
RNHKIPISMMSLSVDVLKLIPDNRKEMKKIIDYYHSMATVIVKTLGSYAKKTCQQGRIRSDEDFKYLAKKINENVLLKELQLKKVDKLKISDSTKDKVAE
YIRKYMSRFGEAYKRKPSGMSATRDTHVCDVSFSPTGCAWSGGGVFGGDGFYGSDGGGPMRTGEMLTSQYKAGR |
| Exon | Start | Stop | Strand | | ACYPIE520128-deanrider | 12465 | 12612 | MINUS | | ACYPIE520129-deanrider | 11954 | 12052 | MINUS | | ACYPIE520130-deanrider | 11682 | 11887 | MINUS | | ACYPIE520131-deanrider | 10780 | 11020 | MINUS | | ACYPIE520132-deanrider | 10590 | 10712 | MINUS | | ACYPIE520133-deanrider | 7613 | 7868 | MINUS | | ACYPIE520134-deanrider | 7434 | 7551 | MINUS | | ACYPIE520135-deanrider | 7187 | 7375 | MINUS | | ACYPIE520136-deanrider | 6191 | 6634 | MINUS | | ACYPIE520137-deanrider | 5006 | 6101 | MINUS | | ACYPIE520138-deanrider | 4802 | 4947 | MINUS | | ACYPIE520139-deanrider | 3735 | 3905 | MINUS |
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Similarity
| organism | tissue_type | clone_lib |
Transcript alignmentsStart | End | Strand | Name |
Summary of organismSummary of tissue_typeSummary of clone_lib |
Protein Similarities| query_name | analysis | hit_name | description | interpro_id | go | positions |
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OtherProperties
| date | Mon Sep 29 18:03:27 CDT 2008 | | problem | false |
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Gmod Report System - copyright INRA 2009 |
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