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Gene Report
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ACYPI005682
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Description
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| Synonym | ACYPI005682_1.1 | | Synonym | LOC100164692 |
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Genomic Position
| Start | Stop | Strand | | 1336 | 33479 | MINUS |
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Transcripts
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| mRNA Name | Scaffold | Start | Stop | Strand | XM_001949361 | EQ113364 | 1336 | 33479 | MINUS |
>XM_001949361_mRNA
atgaaatgtatattagcaacaagaataaatgaatttcacattctggttagcgaaggcccacacccgcacgctttactggggaagacaagacggccaagaa
ctgcattcactagtcagcagcttctagagttggaaaaacaattcagacaaaacaaatatttatccagacctaaaagattcgaggtggctacaaatttaat
gctcactgaaacacaagtgaaaatttggtttcaaaatcgccggatgaaatggaaacgcagtaaaaaagctcagcaagaagctaaaatatcctcgagggac
gatacggcgttggaaaaacgaggaaccgtatttgtggttaatgcagttgatgctaaagccactgacgaggggtttaatacaaacatggaagaagctacac
aattccttcgtgaatgggaaaacgaagcagtagccttgtgcaatagagtggcgatggcacagtggacatatgcaacaaatataacggaatacaataaaaa
gcaaatgatagatgaacaaaaattgaactcaaagttcaatagagtatcttggaggaaagcttctgatttcatgtggacccgtatatctgatcctattata
caaaggcaactcaaaattttggcactgaaaggccaatcgaatgtacccgattcaaaactaaatcagatgcattcgattttaaatgaaatgaaagatattt
atgctaaagcgaaaatatgtccattcaattatagattgacatcgtattgtgaactaagtcttgaaccagatttagtaagagtaatggctaactcaagaga
ttttgaagagctattgtatacatggcgttcatggagagataatattggacatgaaattcgacccaaatacatcaaatatatggaattggttaacgaagct
gcaatggcaatagggtttgaggatgcgggtcaacaacaaatcgccatgtatgaagatgcaaattttaaagcaaaacttgaaaatttatggacagccatag
agccgatttataaacatctccactcttacgttcggcgaaaattagtttctcactatggtacacgcagggttcgagtcgatggaccaattccagcgcattt
actaggtaacatgtgggcacagaactggaaaaacataatagacttagtgattccatttccgaagaaaagacgtattgatgtttccggtgaaatgttacgt
caaggatacacgcctttaaagatgttccaaatgtctgaagaatttttcacatcacttggattaaaagcgatgccagtggagttttggcataattcaattt
tggaaaagccaacaaacaggccagtgtcgtgcaaagcatcggcttgggatttttgtgataaatatgattacagaattaaacaatgcactgaagtttcaat
ggatgatctattttcgacacatcacgaaatggctcatattcaatattatctccattatacagatcagccattgctgtttaaagaaggagcgaatcccggt
tttcatgaagcgttgagtgatgccgttattctttccatttccacaccacgacatttacataggattggactattgaataacataactgacgattatgaag
gtcaaatagacttcttaatggaaatggctttagacaaaattgcttatctaccttttgcctactcagttgatttgtggcgatggagcgttttttccaaagg
cgtacacaacttaaatgctcgatggtgggatttaaaattattgtatcaaggaatcattccgccgattgccagggatgaaaacgatttcgatccaagttct
aagtatcatgtaatcgctgatactccttatataaaatacttcattagcatcattctacagtttcaaatacatgaagccttgtgtacagcagcaggacata
ttggtccattacatacttgtgacatataccgttcaagagaagctggtcgaatattgagtattgctagtatgctactcactagtatgcaagcctggattaa
ggatcaattgggccccggaacaccatacacttag |
>XM_001949361_prot
MKCILATRINEFHILVSEGPHPHALLGKTRRPRTAFTSQQLLELEKQFRQNKYLSRPKRFEVATNLMLTETQVKIWFQNRRMKWKRSKKAQQEAKISSRD
DTALEKRGTVFVVNAVDAKATDEGFNTNMEEATQFLREWENEAVALCNRVAMAQWTYATNITEYNKKQMIDEQKLNSKFNRVSWRKASDFMWTRISDPII
QRQLKILALKGQSNVPDSKLNQMHSILNEMKDIYAKAKICPFNYRLTSYCELSLEPDLVRVMANSRDFEELLYTWRSWRDNIGHEIRPKYIKYMELVNEA
AMAIGFEDAGQQQIAMYEDANFKAKLENLWTAIEPIYKHLHSYVRRKLVSHYGTRRVRVDGPIPAHLLGNMWAQNWKNIIDLVIPFPKKRRIDVSGEMLR
QGYTPLKMFQMSEEFFTSLGLKAMPVEFWHNSILEKPTNRPVSCKASAWDFCDKYDYRIKQCTEVSMDDLFSTHHEMAHIQYYLHYTDQPLLFKEGANPG
FHEALSDAVILSISTPRHLHRIGLLNNITDDYEGQIDFLMEMALDKIAYLPFAYSVDLWRWSVFSKGVHNLNARWWDLKLLYQGIIPPIARDENDFDPSS
KYHVIADTPYIKYFISIILQFQIHEALCTAAGHIGPLHTCDIYRSREAGRILSIASMLLTSMQAWIKDQLGPGTPYT |
| Exon | Start | Stop | Strand | | ACYPI005682-RA-E1_0 | 33424 | 33479 | MINUS | | ACYPI005682-RA-E2_0 | 32955 | 33116 | MINUS | | ACYPI005682-RA-E3_0 | 27825 | 27936 | MINUS | | ACYPI005682-RA-E4_0 | 19941 | 19983 | MINUS | | ACYPI005682-RA-E5_0 | 16731 | 16869 | MINUS | | ACYPI005682-RA-E6_0 | 12755 | 12914 | MINUS | | ACYPI005682-RA-E7_0 | 12000 | 12103 | MINUS | | ACYPI005682-RA-E8_0 | 11776 | 11920 | MINUS | | ACYPI005682-RA-E9_0 | 11161 | 11353 | MINUS | | ACYPI005682-RA-E10_0 | 10714 | 10829 | MINUS | | ACYPI005682-RA-E11_0 | 8048 | 8201 | MINUS | | ACYPI005682-RA-E12_0 | 4752 | 4877 | MINUS | | ACYPI005682-RA-E13_0 | 4576 | 4675 | MINUS | | ACYPI005682-RA-E14_0 | 4426 | 4503 | MINUS | | ACYPI005682-RA-E15_0 | 3217 | 3378 | MINUS | | ACYPI005682-RA-E16_0 | 1470 | 1593 | MINUS | | ACYPI005682-RA-E17_0 | 1336 | 1412 | MINUS |
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Similarity
| organism | tissue_type | clone_lib |
Transcript alignmentsStart | End | Strand | Name | | Acyrthosiphon pisum | Whole body, nymphs and adults, winged and wingless | Pea aphid whole body normalized full length cDNA library | 26808 | 27478 | + | FF296447 |
| Acyrthosiphon pisum | Whole body, nymphs and adults, winged and wingless | Pea aphid whole body normalized full length cDNA library | 26795 | 27525 | + | EX624041 |
| Acyrthosiphon pisum | Whole body, nymphs and adults, winged and wingless | Pea aphid whole body normalized full length cDNA library | 26795 | 27291 | + | EX636326 |
Summary of organism| value | Number | frequency | | Acyrthosiphon pisum | 3 | 1.0 |
Summary of tissue_type| value | Number | frequency | | Whole body, nymphs and adults, winged and wingless | 3 | 1.0 |
Summary of clone_lib| value | Number | frequency | | Pea aphid whole body normalized full length cDNA library | 3 | 1.0 |
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Protein Similarities| query_name | analysis | hit_name | description | interpro_id | go | positions |
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OtherProperties
| note | Derived by automated computational analysis using gene prediction method: GNOMON. | | db_xref | GeneID:100164692 | | curation_status | unchecked |
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Gmod Report System - copyright INRA 2009 |
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