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Gene Report
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ACYPI004007
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Description
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| Synonym | ACYPI004007_1.1 | | Synonym | LOC100162887 |
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Genomic Position
| Start | Stop | Strand | | 147659 | 193429 | MINUS |
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Transcripts
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| mRNA Name | Scaffold | Start | Stop | Strand | XM_001943654 | EQ126522 | 147659 | 193429 | MINUS |
>XM_001943654_mRNA
gtgacttacaggctactggacacttgccggtgactgactggtgagtacttactgtttgacatgtaagcttgacaatatggaagaaccgtccgaggacaag
cttttcgtcgctgaaaaatctaagagcaacagggcaaaatgtaaaaagtgtaaagaagtcttaaatcaaggagcgttgaggattgccaaagttgttgcga
atccatttggtgatgggaaaatgatggcttggcatcatccgcagtgtttagtaactgtattttctaagcagagagcgtcgacggcgaaaattacctgtgt
ggacgatatcggtggctgggacggactgtccatggaacaccaaaacgaaatattgatgacttttcccgatattcctaaggagaaacttaaaacacacgat
gacgaagagcctggcaaaaaagacacacccaataaaaagaaaccaaaagcaaaacctgtgccgtcctcgccaccaacccaagattactattttaaagatt
ttcgaaaactgtgtttgagtctctcgcaggaaaatagccatcttcaaaaaactgctatttttaaagaatttatcgataaaattttatccaaagaacattc
aaacgagacccgtgccgaaagtatgtttttatggtgtaaaatgttgttgcccaattcggaaaaaagaatttacaatctacaatcaaaacaactcattaaa
ctatatagtcaattgtttaaacaaaatgtaaacttaatgctggaagatttggaaaagggagacgttgctgaaacgataagaatattttttgaaaaaagta
acaatgttgatgtaaaaccagcatcaaaatcaactttgacattagctaaagtaaacagttttctcgataaattatcaattgaaactacagaagtcgcaca
aacggcccttttcaaatcaatcgccaaattatgtactgggaatgatttgaaaatgataattcggctagtgatgcacgatctcagaattaattgcggccca
aaatttattttaggggcacttcattctgatgcatatgaagcataccaaacatcacatgatttaaaatctgttgtacagaacgcgtgttcatgtgattcat
ctaagatagctagcaatggaaaaatgaacattaaattatctttgttaacaccgattttaccaatgttggctgaaccatgcaaaaatttagatgacttttt
taaaaagtgtcctaatggtatatactcagaaattaaatatgacggggaacgtgttcaactgcataaaagtgaaacacaatttaaatttttttcaagaagt
ctaaaacctgtcttgggacataaagttgatttatttaaacagtatattcctaaagcttttcagcatggaaaagagattattttagattgtgaagtactaa
tgtatgaccacaaaactaataaacctttaccatttggtaccttaggcattcacaagaaaagtaaatttgaagatgctaatccttgcctgtttgtttttga
ctgcatgtattacaatggtgtatcattattagatagaacaattgtagaacgaagaaaaattctaatgcagaatatgactccaatcaagggacatatcatg
ttttcagaagttaaagagttgcataacactaaagaacttaagttaatggtagaacatgtattgaaacaaggcctagaaggattagtattaaaggatctaa
caggggtttatgagcctggaaagcgacattggcaaaaaataaaaaaagactacctatttgatggatccatggctgatagcgctgatcttgttgttcttgg
tgcatggtttggtactgggaataaaggtggtatgatgtccatatttttaatgggttgctataatgaagcaaaaaaaaaatggtgtacagtgacaaaagta
catggtggtcacgatgataaaacactagaaagattacagggtgaattaaaaatgatcaaaattagtaaagatccagaaaaagttccagagtggttaaaat
gcactaaaactatgattccggattttgtagcagaagatcctaaaaaaatgccagtttgggaaatttcaggagcagaattttctcaagctgaagtgcacac
tgctaatggtatatcgattagattccctagagtaactaaaattaggaatgacaaagattggaaaactgcaacatcattaactgaattgcaaaatttatat
gaagcatccaaagaaactaacaatttaagtattttttcaaacctaagcccggaaaagaatactagttctgacaatgacttacagtcatcacctgagaaaa
gaaataaaattaagagaactctggaaacagctgttacagaatcttctccgttaaaaatgaatactgaaattcctgttaaaagagcaaaactttctgatga
acggcggaggcgtttgcctgatttattcactggaatccgtgtggttgtgccagattcgatttctaaaaatacgtttttacgatattttattgcctatgga
ggtacacctttaaattcatcaaatgaattagcacctacacatgttatagttcaaaaaaaagagcacaatcgatcatctgaaaaacctatgaaggaagaga
agaaggagaagaagaagagtttgaacgctactgccgtgtgcgcgcaatggttttgggacagcatacgaaaaggaacgcaattgcccacagaaaactatca
ataaaataaatcgaatatccaagatttactttgcgtcgcacccgcatatttttatttgttatactattatcgtttcttcgaccagtcggattttcagcca
atataataataatataatata |
>XM_001943654_prot
MEEPSEDKLFVAEKSKSNRAKCKKCKEVLNQGALRIAKVVANPFGDGKMMAWHHPQCLVTVFSKQRASTAKITCVDDIGGWDGLSMEHQNEILMTFPDIP
KEKLKTHDDEEPGKKDTPNKKKPKAKPVPSSPPTQDYYFKDFRKLCLSLSQENSHLQKTAIFKEFIDKILSKEHSNETRAESMFLWCKMLLPNSEKRIYN
LQSKQLIKLYSQLFKQNVNLMLEDLEKGDVAETIRIFFEKSNNVDVKPASKSTLTLAKVNSFLDKLSIETTEVAQTALFKSIAKLCTGNDLKMIIRLVMH
DLRINCGPKFILGALHSDAYEAYQTSHDLKSVVQNACSCDSSKIASNGKMNIKLSLLTPILPMLAEPCKNLDDFFKKCPNGIYSEIKYDGERVQLHKSET
QFKFFSRSLKPVLGHKVDLFKQYIPKAFQHGKEIILDCEVLMYDHKTNKPLPFGTLGIHKKSKFEDANPCLFVFDCMYYNGVSLLDRTIVERRKILMQNM
TPIKGHIMFSEVKELHNTKELKLMVEHVLKQGLEGLVLKDLTGVYEPGKRHWQKIKKDYLFDGSMADSADLVVLGAWFGTGNKGGMMSIFLMGCYNEAKK
KWCTVTKVHGGHDDKTLERLQGELKMIKISKDPEKVPEWLKCTKTMIPDFVAEDPKKMPVWEISGAEFSQAEVHTANGISIRFPRVTKIRNDKDWKTATS
LTELQNLYEASKETNNLSIFSNLSPEKNTSSDNDLQSSPEKRNKIKRTLETAVTESSPLKMNTEIPVKRAKLSDERRRRLPDLFTGIRVVVPDSISKNTF
LRYFIAYGGTPLNSSNELAPTHVIVQKKEHNRSSEKPMKEEKKEKKKSLNATAVCAQWFWDSIRKGTQLPTENYQ |
| Exon | Start | Stop | Strand | | ACYPI004007-RA-E1_0 | 193362 | 193429 | MINUS | | ACYPI004007-RA-E2_0 | 167373 | 167677 | MINUS | | ACYPI004007-RA-E3_0 | 167058 | 167280 | MINUS | | ACYPI004007-RA-E4_0 | 166389 | 166508 | MINUS | | ACYPI004007-RA-E5_0 | 166001 | 166219 | MINUS | | ACYPI004007-RA-E6_0 | 165844 | 165922 | MINUS | | ACYPI004007-RA-E7_0 | 160948 | 161108 | MINUS | | ACYPI004007-RA-E8_0 | 160720 | 160876 | MINUS | | ACYPI004007-RA-E9_0 | 160442 | 160574 | MINUS | | ACYPI004007-RA-E10_0 | 160296 | 160376 | MINUS | | ACYPI004007-RA-E11_0 | 159591 | 159679 | MINUS | | ACYPI004007-RA-E12_0 | 159435 | 159513 | MINUS | | ACYPI004007-RA-E13_0 | 158388 | 158512 | MINUS | | ACYPI004007-RA-E14_0 | 158210 | 158323 | MINUS | | ACYPI004007-RA-E15_0 | 157340 | 157445 | MINUS | | ACYPI004007-RA-E16_0 | 155477 | 155624 | MINUS | | ACYPI004007-RA-E17_0 | 155284 | 155407 | MINUS | | ACYPI004007-RA-E18_0 | 154821 | 154917 | MINUS | | ACYPI004007-RA-E19_0 | 154150 | 154233 | MINUS | | ACYPI004007-RA-E20_0 | 149884 | 149972 | MINUS | | ACYPI004007-RA-E21_0 | 147659 | 147899 | MINUS |
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Similarity
| organism | tissue_type | clone_lib |
Transcript alignmentsStart | End | Strand | Name | | Acyrthosiphon pisum | Whole body, nymphs and adults, winged and wingless | Pea aphid whole body normalized full length cDNA library | 158467 | 161116 | + | EX632601 |
| Acyrthosiphon pisum | Whole body, nymphs and adults, winged and wingless | Pea aphid whole body normalized full length cDNA library | 167054 | 167678 | + | FF307768 |
| Acyrthosiphon pisum | Whole body, nymphs and adults, winged and wingless | Pea aphid whole body normalized full length cDNA library | 167054 | 167679 | + | FF302110 |
| Acyrthosiphon pisum | Whole body, nymphs and adults, winged and wingless | Pea aphid whole body normalized full length cDNA library | 167054 | 167679 | - | FF302110 |
Summary of organism| value | Number | frequency | | Acyrthosiphon pisum | 4 | 1.0 |
Summary of tissue_type| value | Number | frequency | | Whole body, nymphs and adults, winged and wingless | 4 | 1.0 |
Summary of clone_lib| value | Number | frequency | | Pea aphid whole body normalized full length cDNA library | 4 | 1.0 |
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Protein Similarities| query_name | analysis | hit_name | description | interpro_id | go | positions |
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OtherProperties
| note | Derived by automated computational analysis using gene prediction method: GNOMON. | | db_xref | GeneID:100162887 | | curation_status | unchecked |
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Gmod Report System - copyright INRA 2009 |
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