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Gene Report
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ACYPI002785
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Description
| ID | Histone methyltransferase with PHD and SET domains |
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| Name | Histone methyltransferase with PHD and SET domains |
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| Synonym | Histone methyltransferase with PHD and SET domains | | Synonym | ACYPIG607287-deanrider | | Synonym | ACYPI002785_1.1 |
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| owner | Name : Dean Rider
Institute : TAMU |
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| comments | Gene has complete protein homology support | | comments | Gene has partial EST/cDNA support |
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Genomic Position
| Start | Stop | Strand | | 4867 | 17033 | MINUS |
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Transcripts
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| mRNA Name | Scaffold | Start | Stop | Strand | Histone methyltransferase with PHD and SET domains-transcript | EQ116871 | 4867 | 17033 | MINUS |
>Histone methyltransferase with PHD and SET domains-transcript_mRNA
cttcgagaacacggacaagatggccgattaggttaaacgagagttttttaacgttttcatgtcgattactcgtcgttgtgcgcgttttaaattaaatgtt
atacgaaatatccgagtgtacatcgccggcgatcaagtgttacgttcgacaaaggccgaggccgccgcaatcagatttcctgtgctcaataaaccgacac
gttcgtaatgtttacgttccaggatagagctaaagtgagttggtgatggaatcggatggtaacgtcaggacaccgggaagcgctgcttactttcttgtag
gttcgagtcgcgtgccatgtggtccagccgtctctggccagttgactattcctgtcggacgtcctatgtccaatcaggatgtatcaggacccagtctcat
cgttcagatgacaccatcccgcagtcaaacacaagatcaccatgcacgtgccaccatggtgcggaccacaaatcaaccagtcaccatgcaccgtttccct
ttacagctcaatcatgccagcaccaatcatatactatcaccgaatcaacacttcaaacaaataccagtttatcagagaaacgccagttccattcaaatgg
aatcggttcgaaaaaacgtttttgtttcaactcaagttgcctcaccccaactaccttacagccgagtaggcttaacacctcatatgttaatgacgtatat
gccaccgcgtaatcgccaatcaaataaccaacgatcccgtgttgtgccagtaaatcggcctaatcctatgttaagacgagatcattgccctagtgatgat
gaattattggaagtaactgaacatagacctgtatatgatgctaaaaaacctgcagagttaattaaagtggaacacaactattgcatagttccaagagtgt
cacctcaacgaacaaaccaaattaatggtttgacatcaacaataaatgttacttctggtcaatcttttatccaaaagtcagtaagtattccaaataatgt
gccaataccaacatctgaatccttacaaccattgcaatcattggtaaagcatgaaccacaaattcaagtggaaagtgaattaagtgctagtgatcatgat
ctcgatggccaaggtgaagaaactgatactgcaccggaggctgttgccgaaggcaaagataacattaagtcagaagaacctgcagtaacaagatgtatct
gtgaaatggagcatgatgatggttttatgataagctgtgacaaatgcttagtttggcaacatgttgactgtgtattggagagtagaaataatctacctga
agaatatttatgtgaacgttgttcaccaagaccttttaataaagaagcagcggcggctctacaacatatgaaattggctaaaagaatagcgatggcttca
gcatcacatttacgacattcaagtgactctgatctctcttcagaactagatatgccaatagagcgtagcaatattcaaaataaaagaaaaaagtataaga
gcagacagaaaaatactcctaaacgaaagccaaatggtttgtcatcatctcagatgaaacaacgtcggaaaagtggtccgtcacctggcccaaggaaaaa
aggttccatgactcctgaaaaaaaggctttggctgaagagcgtaaaaaaatgttaattaaacgtaaagaaatgctattggaaaaaaaacgattggcagca
atggacaaaaaaaagaaaactgttgattattcttctgatgaagagccaaaaatatttaaagctgacaaaccgaataaacagcacactaaatctagtattg
aacaaccggttgatcagttacgaaactggattgataaatatgaagaagctgttactaatcattattctcaagaattgcgtgctcgtttgtcagccattaa
accaaatggcagcgtaacaattggtgaacttcgtaccccagttaaaattcccattagtaggacaaaaatgtccttacttcctagtgggataaaaatgtta
gttagtagttcagtattaactaacaatcagccaatagtagaagttcgaggaaaatttacttggactggctcattggcatacaaagatccaatacccaatc
gaacagacccttatgtatttttttatgtggttcgattttctacggactgtgatgtagaggtctgtgttgattgtcgtacatatggtaatgatgcacgttt
tgttcgacgttcatgtaaaccaaatgcagagctaaaacattacattgaaaaaggttctattcatttgtacatagtggcaaatcgatatattgaaaaaaat
actgaaattaccattaatcatcaggctgcagttccatttaaacgatgtaattgtggagatccatcaacatgtacatcttctataagcccaatacctcctg
taacaacacctcctatccctgttgtaccaaaaagttcttcttcctcaccaatgatagacccaactgttagtaattcttcagacgatgaaaataaaccaca
aagaaataaaagaactaggcaacaaagaattatgaagaaaccaaataagaaaattatgaaaagaactttacccaaggttgaaacaccacctccacctcct
ccaccacctttactcccaccagcacctctaccatcacctcttccacctgttaaaagtaaagaacctaacggaccgggtaggccaaaaagtcctgtcaaaa
agttggaaacgagtcctgagcctgaccataaatcaatcaacagtgataataaactggtgaaaagagtaaatgagatgtcaagggaagagagaaagatggt
agctattatgaaagcttttgaaagaatggaaaaaaaagaagctcgaaaacaagaatcgaggtcacataaagatacagattccttcaataattcttcaccc
cataatctaaatagaaatagagttcgaaaaagcgttgttaaaaggaaacaacggccatctaataaaaatagtcgctctaagtcaacaagaacaaacagac
cacagcgtagagcggctgcaatttcatctcatacctataatagttcatcagatgaagatgacaataataatgatgatgatgatgatgatgaggacagaaa
aggtcgtttattgtccaaaaaacgtgttcagaaccgttgtaaattttcagtgcgcttccaacacaggccgtctctttcatctattcctcggtctatgtta
cggcgatcaccacacagtagtctaattaatactccccttaagatggatagtgaagaagctagtggtagtgaaggaactcctccagccccgttatctaaca
catgtatgttagtagctgctgcagttggaccacttgctccaggtttcaaatttcctaatacaaaaaaagattttgttaactcatgggtgaagtctgaagg
aaattctccaactggaagtgaagacttcaaactaggcgaatcaggttgtgctaaaaaaaggtggctacaacaagctattagtgaacaaggtattaacaat
atcgataattttaaaattgtgtttcttcttattcttcttctgtgccttcacaactctgtaagagttttggctgccaccgtcactgctcttcaataa |
>Histone methyltransferase with PHD and SET domains-transcript_prot
MESDGNVRTPGSAAYFLVGSSRVPCGPAVSGQLTIPVGRPMSNQDVSGPSLIVQMTPSRSQTQDHHARATMVRTTNQPVTMHRFPLQLNHASTNHILSPN
QHFKQIPVYQRNASSIQMESVRKNVFVSTQVASPQLPYSRVGLTPHMLMTYMPPRNRQSNNQRSRVVPVNRPNPMLRRDHCPSDDELLEVTEHRPVYDAK
KPAELIKVEHNYCIVPRVSPQRTNQINGLTSTINVTSGQSFIQKSVSIPNNVPIPTSESLQPLQSLVKHEPQIQVESELSASDHDLDGQGEETDTAPEAV
AEGKDNIKSEEPAVTRCICEMEHDDGFMISCDKCLVWQHVDCVLESRNNLPEEYLCERCSPRPFNKEAAAALQHMKLAKRIAMASASHLRHSSDSDLSSE
LDMPIERSNIQNKRKKYKSRQKNTPKRKPNGLSSSQMKQRRKSGPSPGPRKKGSMTPEKKALAEERKKMLIKRKEMLLEKKRLAAMDKKKKTVDYSSDEE
PKIFKADKPNKQHTKSSIEQPVDQLRNWIDKYEEAVTNHYSQELRARLSAIKPNGSVTIGELRTPVKIPISRTKMSLLPSGIKMLVSSSVLTNNQPIVEV
RGKFTWTGSLAYKDPIPNRTDPYVFFYVVRFSTDCDVEVCVDCRTYGNDARFVRRSCKPNAELKHYIEKGSIHLYIVANRYIEKNTEITINHQAAVPFKR
CNCGDPSTCTSSISPIPPVTTPPIPVVPKSSSSSPMIDPTVSNSSDDENKPQRNKRTRQQRIMKKPNKKIMKRTLPKVETPPPPPPPPLLPPAPLPSPLP
PVKSKEPNGPGRPKSPVKKLETSPEPDHKSINSDNKLVKRVNEMSREERKMVAIMKAFERMEKKEARKQESRSHKDTDSFNNSSPHNLNRNRVRKSVVKR
KQRPSNKNSRSKSTRTNRPQRRAAAISSHTYNSSSDEDDNNNDDDDDDEDRKGRLLSKKRVQNRCKFSVRFQHRPSLSSIPRSMLRRSPHSSLINTPLKM
DSEEASGSEGTPPAPLSNTCMLVAAAVGPLAPGFKFPNTKKDFVNSWVKSEGNSPTGSEDFKLGESGCAKKRWLQQAISEQGINNIDNFKIVFLLILLLC
LHNSVRVLAATVTALQ |
| Exon | Start | Stop | Strand | | ACYPIE607294-deanrider | 16811 | 17033 | MINUS | | ACYPIE607295-deanrider | 11602 | 11955 | MINUS | | ACYPIE607296-deanrider | 11340 | 11528 | MINUS | | ACYPIE607297-deanrider | 11162 | 11256 | MINUS | | ACYPIE607298-deanrider | 10954 | 11063 | MINUS | | ACYPIE607299-deanrider | 10538 | 10773 | MINUS | | ACYPIE607300-deanrider | 9733 | 9781 | MINUS | | ACYPIE607301-deanrider | 9462 | 9662 | MINUS | | ACYPIE607302-deanrider | 7345 | 7614 | MINUS | | ACYPIE607303-deanrider | 6964 | 7240 | MINUS | | ACYPIE607304-deanrider | 6657 | 6894 | MINUS | | ACYPIE607305-deanrider | 6048 | 6594 | MINUS | | ACYPIE607306-deanrider | 5817 | 5981 | MINUS | | ACYPIE607307-deanrider | 5180 | 5607 | MINUS | | ACYPIE607308-deanrider | 4867 | 5095 | MINUS |
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Similarity
| organism | tissue_type | clone_lib |
Transcript alignmentsStart | End | Strand | Name |
Summary of organismSummary of tissue_typeSummary of clone_lib |
Protein Similarities| query_name | analysis | hit_name | description | interpro_id | go | positions |
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OtherProperties
| date | Mon Sep 29 16:56:14 CDT 2008 | | problem | false |
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Gmod Report System - copyright INRA 2009 |
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